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Recent Publications from the Lab

  1. Kassaw, T.K.; Xu, W.; Zalewski, C.S.; Kiwimagi, K.; Weiss, R.; Antunes, M.S.; Prasad, A.; Medford, J.I. (2024) A genetic toggle switch in plants. bioRxiv 2024.11.07.622546. https://doi.org/10.1101/2024.11.07.622546

  2. Ferreira, S.S.; Pandey, S.; Hemminger, J.; Bozdag, S.; Antunes, M.S. (2024) MicroRNA expression changes in Arabidopsis plants during the early stages of Fusarium graminearum infection. bioRxiv 2024.05.29.596347.  https://doi.org/10.1101/2024.05.29.596347

  3. Monti, D.L.; Gill, J.C.; Adair, T.L.; Adams, S.D.; Ahumada-Santos, Y.P.; Amaya, I.; Anders, K.; Anderson, J.R.; Antunes, M.S.; Ayuk, M.; Baliraine, F.; (+103 authors); Graham, M.J.; Sivanathan, V. (2024) An inclusive Research Education Community (iREC) Model to Facilitate Undergraduate Science Education Reform. Frontiers in Education, 9: 1442318.  https://doi.org/10.3389/feduc.2024.1442318

  4. Ferreira, S.S.; Antunes, M.S. (2024) Genetically encoded Boolean logic operators to sense and integrate phenylpropanoid metabolite levels in plants. New Phytologist, 243: 674-687. http://doi.org/10.1111/nph.19823

  5. Anderson, C.E.; Ferreira, S.S.; Antunes, M.S. (2023) Integration of multiple stress signals in plants using synthetic Boolean logic gates. Plant Physiology. https://doi.org/10.1093/plphys/kiad254

  6. Ferreira, S.S.; Anderson, C.E.; Antunes, M.S. (2023) A logical way to reprogram plants. Biochemical and Biophysical Research Communications 654: 80-86. https://doi.org/10.1016/j.bbrc.2023.02.080

  7. Amack, S.C.; Ferreira, S.S.; Antunes, M.S. (2023) Tuning the Transcriptional Activity of the CaMV 35S Promoter in Plants by Single-Nucleotide Changes in the TATA Box. ACS Synthetic Biology 12(1): 178-185. https://doi.org/10.1021/acssynbio.2c00457

  8. Hanauer, D.I.; Zhang, T.; Graham, M.J.; Adams, S.D.; Yesmi, P.; lvey, R.M.; Antunes, M.S.; Ayuk, M.A.; Báez-Flores, M.E.; Bancroft, C.T.; (+130 authors); Jacobs-Sera, D.; Hatfull, G.F.; Asai, D.J.; Sivanathan, V. (2023) Models of Classroom Assessment for Course-Based Research Experiences. Frontiers in Education, 8: 1279921. https://doi.org/10.3389/feduc.2023.1279921

  9. Ferreira, S.S.; Antunes, M.S. (2021) Re-engineering plant phenylpropanoid metabolism with the aid of synthetic biosensors. Frontiers in Plant Science 12:701385. https://doi.org/10.3389/fpls.2021.701385

  10. Amack, S.C.; Antunes, M.S. (2020) CaMV35S promoter - A plant biology and biotechnology workhorse in the era of synthetic biology. Current Plant Biology 24: 100179. https://doi.org/10.1016/j.cpb.2020.100179

  11. Kassaw, T.K.; Donayre-Torres, A.J.; Antunes, M.S.; Morey, K.J.; Medford, J.I. (2018) Engineering Synthetic Regulatory Circuits in Plants. Plant Science 273: 13-22. https://doi.org/10.1016/j.plantsci.2018.04.005

  12. Bick, M.J.; Greisen, P.J.; Morey, K.J.; Antunes, M.S.; La, D.; Sankaran, B.; Reymond, L.; Johnsson, K.; Medford, J.I.; Baker, D. (2017) Computational design of environmental sensors for the potent opioid fentanyl. eLife 6: e28909. https://doi.org/10.7554/eLife.28909